STRINGSTRING
SUN_0457 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0457" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0457Hypothetical protein (181 aa)    
Predicted Functional Partners:
SUN_0458
DNA polymerase III subunit delta’ (205 aa)
 
     
  0.962
SUN_0456
Aspartate kinase (401 aa)
   
        0.886
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (442 aa)
       
 
  0.807
nudH
Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (157 aa)
              0.791
rpmC
50S ribosomal protein L29 (63 aa)
   
          0.778
SUN_2200
Hypothetical protein (79 aa)
   
          0.778
SUN_0540
Hypothetical protein (363 aa)
   
          0.778
SUN_2368
Hypothetical protein (176 aa)
   
          0.776
SUN_1907
Hypothetical protein (216 aa)
   
          0.776
SUN_0420
Hypothetical protein (336 aa)
   
          0.776
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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