STRINGSTRING
SUN_0481 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0481" - Membrane-bound lytic murein transglycosylase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0481Membrane-bound lytic murein transglycosylase (339 aa)    
Predicted Functional Partners:
SUN_2355
Hypothetical protein (266 aa)
       
    0.719
SUN_1180
Hypothetical protein (445 aa)
       
    0.719
SUN_0826
Hypothetical protein (232 aa)
       
    0.719
SUN_0450
Hypothetical protein (213 aa)
       
    0.719
SUN_0447
Glycosyl hydrolase family protein (361 aa)
   
 
    0.716
SUN_1240
Aminoglycoside phosphotransferase (315 aa)
 
        0.660
SUN_0480
NhaA family Na(+)/H(+) antiporter (399 aa)
              0.598
SUN_0399
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (577 aa)
     
 
    0.542
SUN_1239
Nucleotidyltransferase (238 aa)
 
          0.482
rlmH
Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (153 aa)
 
        0.478
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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