STRINGSTRING
fur protein (Sulfurovum sp. NBC371) - STRING interaction network
"fur" - Ferric uptake regulator in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
furFerric uptake regulator (148 aa)    
Predicted Functional Partners:
SUN_0484
Colicin V production protein (206 aa)
   
   
  0.881
lysS
lysyl-tRNA synthetase (547 aa)
              0.691
SUN_0485
Twitching motility protein PilT (352 aa)
              0.682
SUN_0439
Catalase (480 aa)
   
   
  0.668
gatC
glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (96 aa)
              0.643
SUN_0486
Hypothetical protein (113 aa)
              0.613
polA
DNA polymerase I (898 aa)
   
   
  0.581
SUN_1386
Ferrous iron transport protein B; Fe(2+) uptake system, probably driven by GTP (705 aa)
         
  0.579
SUN_0805
Ferrous iron transport protein B; Fe(2+) uptake system, probably driven by GTP (707 aa)
         
  0.579
SUN_1284
AhpC/TSA family peroxiredoxin (232 aa)
   
   
  0.518
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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