STRINGSTRING
SUN_0484 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0484" - Colicin V production protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0484Colicin V production protein (206 aa)    
Predicted Functional Partners:
fur
Ferric uptake regulator (148 aa)
   
   
  0.881
SUN_0485
Twitching motility protein PilT (352 aa)
              0.707
gatC
glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (96 aa)
         
  0.697
SUN_0540
Hypothetical protein (363 aa)
   
          0.687
lysS
lysyl-tRNA synthetase (547 aa)
              0.681
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine (456 aa)
   
   
  0.678
SUN_2059
Hypothetical protein (361 aa)
   
        0.669
SUN_1974
Hypothetical protein (155 aa)
   
          0.664
SUN_2200
Hypothetical protein (79 aa)
   
          0.654
SUN_0486
Hypothetical protein (113 aa)
              0.639
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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