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STRINGSTRING
SUN_0490 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0490" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0490annotation not available (134 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily (367 aa)
              0.852
SUN_0488
annotation not available (114 aa)
              0.826
SUN_0511
annotation not available (215 aa)
   
          0.717
SUN_1145
annotation not available (479 aa)
   
          0.716
SUN_0509
annotation not available (315 aa)
   
          0.703
SUN_0512
annotation not available (383 aa)
   
          0.672
SUN_0494
Uncharacterized protein; Similar to N terminus of signal transduction response regulator (GGDEF/EAL family protein) (368 aa)
   
          0.654
SUN_0491
annotation not available (339 aa)
              0.643
SUN_0510
annotation not available (1117 aa)
   
          0.631
SUN_0888
annotation not available (457 aa)
   
          0.621
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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