STRINGSTRING
SUN_0490 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0490" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0490Hypothetical protein (134 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (367 aa)
              0.862
SUN_0488
Hypothetical protein (114 aa)
              0.834
SUN_0491
Two-component sensor histidine kinase (339 aa)
              0.657
SUN_0692
Hypothetical protein (119 aa)
   
          0.577
SUN_1596
Hypothetical protein (151 aa)
   
          0.479
SUN_0646
Hypothetical protein (209 aa)
   
          0.467
SUN_0504
Hypothetical protein (261 aa)
   
          0.459
SUN_1145
Hypothetical protein (479 aa)
   
          0.457
SUN_0509
Hypothetical protein (315 aa)
 
          0.432
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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