STRINGSTRING
SUN_0532 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0532" - TonB-dependent receptor in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0532TonB-dependent receptor (686 aa)    
Predicted Functional Partners:
pnuC
Nicotinamide mononucleotide transporter (202 aa)
 
          0.969
SUN_0533
Hypothetical protein (84 aa)
 
          0.968
SUN_1255
Hypothetical protein (320 aa)
   
  0.934
SUN_0535
Hypothetical protein (240 aa)
              0.834
SUN_1618
Biopolymer ExbD/TolR family transporter (125 aa)
 
 
  0.808
SUN_1769
Biopolymer ExbB/TolQ family transporter (190 aa)
   
 
  0.789
SUN_1617
Biopolymer ExbB/TolQ family transporter (146 aa)
   
 
  0.789
SUN_1768
Biopolymer ExbD/TolR family transporter (128 aa)
   
 
  0.770
SUN_0338
Hypothetical protein (226 aa)
   
          0.611
hisC
Histidinol-phosphate aminotransferase (364 aa)
   
      0.580
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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