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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SUN_0718 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0718" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0718annotation not available (112 aa)    
Predicted Functional Partners:
SUN_0719
annotation not available (263 aa)
              0.845
SUN_0720
annotation not available (424 aa)
              0.801
fabI
annotation not available (275 aa)
              0.660
SUN_0721
annotation not available (112 aa)
              0.645
SUN_0722
annotation not available (698 aa)
              0.571
SUN_0716
annotation not available (164 aa)
              0.477
SUN_0793
annotation not available (459 aa)
     
 
  0.440
SUN_1559
annotation not available (770 aa)
 
     
  0.440
SUN_2139
annotation not available (390 aa)
     
 
  0.402
cmoB
tRNA U34 carboxymethyltransferase; Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs (301 aa)
     
 
  0.402
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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