STRINGSTRING
SUN_0722 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0722" - Transcription accessory protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0722Transcription accessory protein (698 aa)    
Predicted Functional Partners:
nusG
Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination (176 aa)
     
 
  0.813
SUN_0721
Hypothetical protein (112 aa)
              0.752
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1509 aa)
     
 
  0.710
SUN_0719
RNA methyltransferase (263 aa)
   
      0.635
SUN_0720
Hypothetical protein (424 aa)
              0.610
SUN_1075
Hypothetical protein (303 aa)
     
      0.607
SUN_0718
S23 ribosomal protein (112 aa)
              0.578
SUN_0724
Hypothetical protein (89 aa)
              0.555
SUN_0723
Hypothetical protein (89 aa)
              0.555
pnp
Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (729 aa)
     
 
  0.538
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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