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SUN_0745 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0745" - Ribosomal small subunit pseudouridine synthase A in Sulfurovum sp. NBC371
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0745Ribosomal small subunit pseudouridine synthase A (188 aa)    
Predicted Functional Partners:
SUN_2370
Ribosomal large subunit pseudouridine synthase D (309 aa)
 
  0.827
rluD
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil (317 aa)
 
  0.814
SUN_0365
Ribosomal large subunit pseudouridine synthase D (245 aa)
   
  0.779
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (467 aa)
 
   
  0.768
SUN_1181
DNA methylase (203 aa)
 
        0.712
SUN_0747
Hypothetical protein (191 aa)
 
          0.639
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity (359 aa)
 
      0.621
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (277 aa)
 
   
  0.615
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (732 aa)
   
 
  0.578
rpsA
30S ribosomal protein S1 (552 aa)
   
      0.571
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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