STRINGSTRING
SUN_0839 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0839" - C4-dicarboxylate transporter permease in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0839C4-dicarboxylate transporter permease (623 aa)    
Predicted Functional Partners:
SUN_1257
C4-dicarboxylate transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (365 aa)
 
   
  0.985
SUN_0838
Hypothetical protein (392 aa)
         
  0.783
SUN_0837
GTP-binding protein (158 aa)
              0.783
SUN_0836
Hypothetical protein (624 aa)
 
          0.745
fbaA
Fructose-bisphosphate aldolase (357 aa)
         
    0.743
SUN_0835
Hypothetical protein (183 aa)
              0.521
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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