STRINGSTRING
SUN_0878 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0878" - 5-oxoprolinase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_08785-oxoprolinase (340 aa)    
Predicted Functional Partners:
SUN_1074
Hypothetical protein (151 aa)
   
          0.707
SUN_1437
Multidrug ABC transporter ATP-binding protein (589 aa)
   
          0.608
SUN_0877
Aspartate aminotransferase (581 aa)
              0.587
SUN_0803
Hypothetical protein (433 aa)
   
          0.550
SUN_0876
Carbon-nitrogen hydrolase family protein (377 aa)
 
          0.507
SUN_2080
ABC transporter ATP-binding protein (588 aa)
   
          0.506
SUN_0840
Lipid kinase (298 aa)
   
          0.492
SUN_1157
Sulfatase (638 aa)
   
          0.465
SUN_2000
Hypothetical protein (519 aa)
   
          0.410
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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