STRINGSTRING
SUN_0920 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0920" - dnaK suppressor protein DksA in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0920dnaK suppressor protein DksA (114 aa)    
Predicted Functional Partners:
nfnB
NAD(P)H-flavin oxidoreductase (210 aa)
              0.718
SUN_1674
Hypothetical protein (270 aa)
   
          0.648
SUN_0922
GntR family transcriptional regulator (459 aa)
              0.495
SUN_0103
Oligosaccharide transferase (706 aa)
   
          0.464
SUN_2250
Hypothetical protein (161 aa)
   
          0.414
SUN_2084
Hypothetical protein (899 aa)
   
          0.414
SUN_1583
Hypothetical protein (252 aa)
   
          0.412
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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