STRINGSTRING
sufE protein (Sulfurovum sp. NBC371) - STRING interaction network
"sufE" - Fe-S cluster assembly protein SufE in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufEFe-S cluster assembly protein SufE (142 aa)    
Predicted Functional Partners:
sufD
Fe-S cluster assembly protein SufD (397 aa)
 
 
  0.988
sufB
Fe-S cluster assembly protein SufB (478 aa)
 
 
  0.987
sufC
Fe-S cluster assembly ATPase SufC (252 aa)
 
 
  0.983
SUN_0995
Metal-sulfur cluster biosynthetic enzyme (167 aa)
              0.906
iscS
Cysteine desulfurase (400 aa)
   
 
  0.798
SUN_0006
Hypothetical protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (324 aa)
   
 
  0.793
SUN_1787
ThiF/MoeB/HesA family protein (231 aa)
   
 
  0.767
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP (311 aa)
   
      0.754
SUN_1077
Hypothetical protein (152 aa)
   
 
  0.741
SUN_1307
Hypothetical protein (211 aa)
     
 
  0.717
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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