STRINGSTRING
SUN_1076 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1076" - Exonuclease in Sulfurovum sp. NBC371
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1076Exonuclease (244 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (355 aa)
     
  0.957
dnaE
DNA polymerase III subunit alpha (1188 aa)
   
  0.932
dnaX
DNA polymerase III subunit gamma and tau (666 aa)
     
  0.905
SUN_0431
Ribonuclease (655 aa)
     
  0.815
cca
Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase (485 aa)
   
 
    0.802
SUN_1028
Hypothetical protein (938 aa)
   
  0.800
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (161 aa)
     
 
  0.796
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (317 aa)
 
 
  0.789
rpmC
50S ribosomal protein L29 (63 aa)
   
 
    0.785
pnp
Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (729 aa)
   
  0.775
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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