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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SUN_1085 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1085" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1085annotation not available (134 aa)    
Predicted Functional Partners:
SUN_1086
annotation not available (453 aa)
 
   
  0.994
SUN_1087
annotation not available (397 aa)
 
          0.971
SUN_1088
annotation not available (522 aa)
 
     
  0.926
gdhA
annotation not available (453 aa)
       
  0.815
gltB
annotation not available (1471 aa)
         
  0.810
glsA
annotation not available (358 aa)
       
    0.800
glnA
annotation not available (476 aa)
         
  0.800
menG
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (169 aa)
 
          0.625
SUN_1218
annotation not available (130 aa)
         
  0.537
metH
annotation not available (1169 aa)
           
  0.499
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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