STRINGSTRING
SUN_1116 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1116" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1116Hypothetical protein (110 aa)    
Predicted Functional Partners:
SUN_1115
Hypothetical protein (228 aa)
              0.700
SUN_1117
Hypothetical protein (157 aa)
              0.617
lpxB
ipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (349 aa)
              0.570
SUN_1161
Hypothetical protein (329 aa)
   
          0.478
SUN_1118
Choloylglycine hydrolase (372 aa)
              0.473
SUN_1119
NahC family Na(+)/H(+) antiporter (459 aa)
              0.436
SUN_1113
Hypothetical protein (360 aa)
              0.410
SUN_1856
Hypothetical protein (465 aa)
   
          0.403
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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