STRINGSTRING
SUN_1136 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1136" - Lytic murein transglycosylase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1136Lytic murein transglycosylase (428 aa)    
Predicted Functional Partners:
gltX2
glutamylglutaminyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (428 aa)
              0.906
SUN_1137
Hypothetical protein (91 aa)
         
  0.905
glnS
glutaminyl-tRNA synthetase (749 aa)
              0.617
SUN_1502
Hypothetical protein (405 aa)
 
   
  0.558
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (68 aa)
 
     
  0.549
SUN_0399
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (577 aa)
         
  0.536
SUN_1503
Hypothetical protein (367 aa)
   
          0.519
SUN_1224
Hypothetical protein (157 aa)
 
      0.515
polA
DNA polymerase I (898 aa)
     
 
  0.504
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (147 aa)
     
      0.459
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
Server load: low (34%) [HD]