STRINGSTRING
SUN_1148 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1148" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1148Hypothetical protein (608 aa)    
Predicted Functional Partners:
dnaQ
DNA polymerase III subunit epsilon (206 aa)
 
   
  0.978
SUN_1146
Hypothetical protein (104 aa)
 
        0.840
SUN_1147
Acetate permease (558 aa)
 
   
  0.831
acs
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (651 aa)
   
        0.711
SUN_2036
5’-nucleotidase (518 aa)
         
    0.705
SUN_0890
5’-nucleotidase (536 aa)
         
    0.705
SUN_0501
Sulfur oxidation protein SoxB (591 aa)
         
    0.705
SUN_2154
DNA polymerase III subunit epsilon (272 aa)
 
   
  0.578
SUN_1145
Hypothetical protein (479 aa)
              0.568
SUN_1143
Hypothetical protein (551 aa)
 
          0.480
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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