STRINGSTRING
gph protein (Sulfurovum sp. NBC371) - STRING interaction network
"gph" - Phosphoglycolate phosphatase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gphPhosphoglycolate phosphatase (225 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase subunit GlcD (463 aa)
       
  0.970
SUN_2092
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (433 aa)
       
    0.968
SUN_1196
Hypothetical protein (478 aa)
 
          0.886
hisI
Histidine biosynthesis bifunctional protein HisI (222 aa)
       
    0.863
SUN_1081
HAD-superfamily hydrolase (207 aa)
   
   
 
0.852
SUN_0197
HAD-superfamily hydrolase (214 aa)
   
   
 
0.850
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (261 aa)
 
   
  0.825
guaB
Inosine 5’-monophosphate dehydrogenase (481 aa)
   
 
    0.796
SUN_2204
Glyceraldehyde 3-phosphate dehydrogenase (331 aa)
   
 
  0.787
SUN_1212
Glyceraldehyde 3-phosphate dehydrogenase (337 aa)
   
 
  0.787
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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