STRINGSTRING
SUN_1229 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1229" - Membrane-bound lytic murein transglycosylase D in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1229Membrane-bound lytic murein transglycosylase D (365 aa)    
Predicted Functional Partners:
SUN_1230
TatD family hydrolase (256 aa)
   
      0.900
SUN_1226
YrbI family phosphatase (165 aa)
 
   
  0.834
SUN_1228
Hypothetical protein (261 aa)
   
   
  0.800
SUN_1220
Peptidoglycan glycosyltransferase (644 aa)
 
 
  0.785
SUN_0399
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (577 aa)
   
   
  0.755
hisB
Imidazoleglycerol-phosphate dehydratase (190 aa)
              0.747
SUN_1224
Hypothetical protein (157 aa)
   
 
  0.739
SUN_0447
Glycosyl hydrolase family protein (361 aa)
         
  0.715
SUN_1741
N-acetylmuramoyl-L-alanine amidase (257 aa)
 
     
  0.710
SUN_1222
Acetyltransferase (154 aa)
   
        0.709
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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