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hemL protein (Sulfurovum sp. NBC371) - STRING interaction network
"hemL" - Glutamate-1-semialdehyde aminotransferase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLGlutamate-1-semialdehyde aminotransferase (430 aa)    
Predicted Functional Partners:
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) (435 aa)
 
  0.999
hemB
Delta-aminolevulinic acid dehydratase (323 aa)
 
 
  0.998
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (323 aa)
 
   
  0.957
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (346 aa)
 
   
  0.883
SUN_1253
Hypothetical protein (155 aa)
              0.859
SUN_0295
Hypothetical protein (188 aa)
 
   
  0.856
SUN_0292
uroporphyrin-III C-methyltransferase (245 aa)
 
 
  0.829
SUN_1246
Hypothetical protein (103 aa)
   
 
    0.818
gdhA
Glutamate dehydrogenase (453 aa)
       
  0.736
gltB
Glutamate synthase (NADPH), large chain (1471 aa)
   
   
  0.734
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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