STRINGSTRING
SUN_1307 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1307" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1307Hypothetical protein (211 aa)    
Predicted Functional Partners:
SUN_1787
ThiF/MoeB/HesA family protein (231 aa)
 
0.847
surE
Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (264 aa)
   
        0.729
sufE
Fe-S cluster assembly protein SufE (142 aa)
     
 
  0.717
iscS
Cysteine desulfurase (400 aa)
       
    0.536
SUN_1754
Hypothetical protein (265 aa)
 
      0.536
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (162 aa)
              0.494
hisS
histidyl-tRNA synthetase (403 aa)
   
        0.443
SUN_1230
TatD family hydrolase (256 aa)
   
        0.411
argC
N-acetyl-gamma-glutamyl-phosphate reductase (335 aa)
              0.405
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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