STRINGSTRING
polA protein (Sulfurovum sp. NBC371) - STRING interaction network
"polA" - DNA polymerase I in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polADNA polymerase I (898 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (355 aa)
   
  0.999
SUN_0458
DNA polymerase III subunit delta’ (205 aa)
   
  0.993
SUN_0725
DNA double-strand break repair protein (373 aa)
   
  0.982
recQ
ATP-dependent DNA helicase RecQ (592 aa)
   
  0.981
SUN_1378
DNA polymerase IV (422 aa)
   
  0.981
SUN_0726
DNA double-strand break repair protein (788 aa)
   
  0.974
dnaE
DNA polymerase III subunit alpha (1188 aa)
   
  0.972
SUN_0436
Pyruvate kinase (488 aa)
   
 
  0.971
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (347 aa)
   
  0.969
xthA
Exodeoxyribonuclease III (256 aa)
     
  0.935
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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