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STRINGSTRING
SUN_1321 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1321" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1321annotation not available (344 aa)    
Predicted Functional Partners:
SUN_1322
annotation not available (118 aa)
   
        0.864
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (153 aa)
   
        0.852
SUN_1320
tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (318 aa)
              0.848
SUN_2319
Uncharacterized protein; Probable gene remnant. Similar to the N- and C-terminal region of Shewanella denitrificans OS217 transposase, mutator type (400 aa) Sden_3720. This CDS appears to have a frameshift mutation following codon 64 (359 aa)
   
          0.784
SUN_2129
annotation not available (226 aa)
   
          0.784
SUN_2257
annotation not available (347 aa)
   
          0.783
SUN_1464
annotation not available (347 aa)
   
          0.783
SUN_1127
annotation not available (326 aa)
   
          0.783
SUN_1487
annotation not available (887 aa)
   
          0.782
SUN_0430
annotation not available (325 aa)
   
          0.782
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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