STRINGSTRING
SUN_1401 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1401" - ABC transporter permease in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1401ABC transporter permease (381 aa)    
Predicted Functional Partners:
SUN_1400
ABC transporter ATP-binding protein (237 aa)
 
   
  0.989
SUN_1402
Efflux system, membrane fusion protein (380 aa)
 
          0.966
SUN_1750
Cell division ATP-binding protein FtsE (224 aa)
       
    0.700
SUN_1072
ABC transporter ATP-binding protein (203 aa)
       
    0.700
SUN_0316
ABC transporter ATP-binding protein (216 aa)
       
    0.700
SUN_1403
Outer membrane efflux protein (417 aa)
 
          0.650
SUN_0377
Hypothetical protein (222 aa)
 
   
    0.602
SUN_2281
Hypothetical protein (202 aa)
   
          0.585
SUN_0293
Crp/FNR family transcriptional regulator (233 aa)
       
    0.532
SUN_1399
Hypothetical protein (125 aa)
              0.508
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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