STRINGSTRING
SUN_1450 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1450" - NUDIX hydrolase in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1450NUDIX hydrolase (141 aa)    
Predicted Functional Partners:
SUN_0674
Glutamine-dependent NAD+ synthetase (631 aa)
   
 
  0.882
SUN_1448
Phosphatidylglycerophosphate synthase (185 aa)
 
          0.878
SUN_1451
Hypothetical protein (116 aa)
              0.859
SUN_1449
Hypothetical protein (74 aa)
              0.859
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (317 aa)
              0.859
nadC
Nicotinate-nucleotide pyrophosphorylase (272 aa)
   
 
  0.824
SUN_2399
Hydrolase (244 aa)
   
 
    0.820
SUN_2125
Hydrolase (290 aa)
   
 
    0.820
SUN_1788
Carbon-nitrogen family hydrolase (273 aa)
   
 
    0.820
SUN_0876
Carbon-nitrogen hydrolase family protein (377 aa)
   
 
    0.820
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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