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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SUN_1467 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1467" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1467annotation not available (247 aa)    
Predicted Functional Partners:
SUN_1469
annotation not available (146 aa)
              0.668
SUN_1468
annotation not available (562 aa)
              0.668
clpA
annotation not available (729 aa)
   
 
  0.547
clpB
annotation not available (857 aa)
   
 
  0.547
SUN_0183
annotation not available (211 aa)
   
          0.520
SUN_1487
annotation not available (887 aa)
 
          0.504
SUN_1127
annotation not available (326 aa)
   
          0.503
SUN_2319
Uncharacterized protein; Probable gene remnant. Similar to the N- and C-terminal region of Shewanella denitrificans OS217 transposase, mutator type (400 aa) Sden_3720. This CDS appears to have a frameshift mutation following codon 64 (359 aa)
   
        0.497
SUN_1575
annotation not available (1212 aa)
   
        0.486
SUN_2129
annotation not available (226 aa)
   
          0.481
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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