STRINGSTRING
SUN_1519 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1519" - Short chain dehydrogenase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1519Short chain dehydrogenase (243 aa)    
Predicted Functional Partners:
SUN_1520
Oxidoreductase (433 aa)
 
 
  0.985
SUN_0332
Oxidoreductase (433 aa)
 
 
  0.961
SUN_1521
Hypothetical protein (135 aa)
 
          0.920
SUN_1522
UbiA prenyltransferase family protein (289 aa)
 
   
  0.873
SUN_0308
Aldehyde dehydrogenase (478 aa)
   
  0.816
SUN_1518
HAD family hydrolase (206 aa)
   
        0.809
SUN_0331
Hypothetical protein (135 aa)
 
          0.794
SUN_1645
Hydrogenase maturation protein HoxX (545 aa)
   
  0.781
SUN_1210
Pyruvate/2-oxoglutarate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase (464 aa)
   
  0.774
SUN_1208
Pyruvate/2-oxoglutarate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase (442 aa)
   
  0.774
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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