STRINGSTRING
SUN_1547 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1547" - Colanic acid exporter in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1547Colanic acid exporter (483 aa)    
Predicted Functional Partners:
SUN_1549
TDP-4-oxo-6-deoxy-D-glucose transaminase (567 aa)
   
 
  0.927
SUN_1559
Capsular polysaccharide biosynthesis protein (770 aa)
 
 
  0.885
SUN_1550
4-alpha-L-fucosyltransferase (355 aa)
 
   
  0.867
SUN_1548
Acetyltransferase (192 aa)
         
  0.841
SUN_1540
Hypothetical protein (320 aa)
 
   
  0.737
SUN_0104
Undecaprenyl-phosphate galactose phosphotransferase (199 aa)
 
   
  0.706
SUN_0098
Polysaccharide biosynthesis protein (417 aa)
 
   
  0.693
SUN_1939
Glycosyl transferase family protein (438 aa)
 
   
  0.670
SUN_1535
Hypothetical protein (315 aa)
 
   
  0.668
SUN_1557
Polysaccharide export system outer membrane protein (253 aa)
 
 
 
  0.655
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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