STRINGSTRING
SUN_1560 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1560" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1560annotation not available (218 aa)    
Predicted Functional Partners:
SUN_1559
annotation not available (770 aa)
              0.514
SUN_1562
annotation not available (291 aa)
         
  0.500
SUN_1561
annotation not available (124 aa)
              0.497
rpsI
annotation not available (129 aa)
     
      0.471
rpmJ
annotation not available (37 aa)
       
 
  0.463
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (232 aa)
       
      0.461
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (196 aa)
       
      0.461
rpmH
annotation not available (44 aa)
       
      0.461
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (87 aa)
       
      0.461
rpsU
annotation not available (70 aa)
       
      0.461
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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