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STRINGSTRING
trpD protein (Sulfurovum sp. NBC371) - STRING interaction network
"trpD" - Anthranilate phosphoribosyltransferase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (325 aa)    
Predicted Functional Partners:
SUN_0471
annotation not available (468 aa)
 
  0.999
trpF
annotation not available (196 aa)
 
  0.998
SUN_0539
annotation not available (189 aa)
 
  0.998
trpC
N terminus of bifunctional TrpC protein, indole-3-glycerol phosphate synthase EC 4.1.1.48/phosphoribosylanthranilate isomerase EC 5.3.1.24 in tryptophan biosynthesis (264 aa)
   
  0.996
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate; Belongs to the TrpA family (247 aa)
   
  0.990
SUN_0653
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (409 aa)
   
  0.968
SUN_1813
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (407 aa)
   
  0.935
SUN_2069
annotation not available (322 aa)
 
   
  0.733
SUN_1587
annotation not available (81 aa)
   
        0.731
SUN_1585
annotation not available (135 aa)
              0.658
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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