STRINGSTRING
SUN_1587 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1587" - RNA-binding S4 protein in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1587RNA-binding S4 protein (81 aa)    
Predicted Functional Partners:
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (325 aa)
              0.722
hemN
Coproporphyrinogen III oxidase (455 aa)
         
    0.711
SUN_0454
Coproporphyrinogen III oxidase (353 aa)
         
    0.711
SUN_1585
Hypothetical protein (135 aa)
              0.645
SUN_1584
ABC transporter ATP-binding protein (240 aa)
              0.645
SUN_0291
Heme d1 biosynthesis protein NirJ (376 aa)
       
    0.534
dbpA
ATP-independent RNA helicase DbpA (453 aa)
     
      0.519
SUN_1435
DEAD/DEAH box helicase (460 aa)
     
      0.519
rhlE
ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA (457 aa)
     
      0.519
SUN_1028
Hypothetical protein (938 aa)
     
      0.519
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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