STRINGSTRING
ate protein (Sulfurovum sp. NBC371) - STRING interaction network
"ate" - arginyl-tRNA-protein transferase in Sulfurovum sp. NBC371
Nodes:
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atearginyl-tRNA-protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (235 aa)    
Predicted Functional Partners:
SUN_0019
Hypothetical protein (165 aa)
 
        0.668
SUN_2129
Hypothetical protein (226 aa)
   
          0.554
SUN_0184
Hypothetical protein (182 aa)
   
          0.527
aat
leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine (248 aa)
 
          0.485
SUN_1776
F0F1 ATP synthase subunit B’ (140 aa)
   
          0.484
SUN_1696
Hypothetical protein (422 aa)
   
        0.482
SUN_1698
Hypothetical protein (235 aa)
              0.474
SUN_1697
Hypothetical protein (126 aa)
              0.470
SUN_1675
General secretory pathway protein D (536 aa)
   
          0.436
SUN_1890
Hypothetical protein (150 aa)
   
        0.412
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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