STRINGSTRING
SUN_1709 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1709" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1709annotation not available (394 aa)    
Predicted Functional Partners:
SUN_1708
annotation not available (250 aa)
              0.842
SUN_0182
annotation not available (76 aa)
   
          0.750
SUN_1188
annotation not available (112 aa)
   
          0.637
SUN_0746
annotation not available (304 aa)
   
          0.628
SUN_2250
annotation not available (161 aa)
   
          0.626
SUN_1635
annotation not available (283 aa)
   
          0.588
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (612 aa)
         
  0.573
SUN_0598
annotation not available (211 aa)
   
 
  0.564
SUN_1912
annotation not available (217 aa)
   
          0.537
SUN_1566
annotation not available (226 aa)
   
          0.530
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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