STRINGSTRING
SUN_1709 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1709" - Transporter in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1709Transporter (394 aa)    
Predicted Functional Partners:
SUN_1708
Molybdenum cofactor biosynthesis protein (250 aa)
   
        0.852
SUN_0669
Periplasmic nitrate reductase component NapL (316 aa)
   
          0.671
SUN_0746
Hypothetical protein (304 aa)
   
          0.649
SUN_0614
Hypothetical protein (192 aa)
   
          0.599
SUN_0598
Lipoprotein thioredoxin (211 aa)
 
 
  0.595
SUN_1566
dUTP diphosphatase (226 aa)
   
          0.570
rpoD
RNA polymerase sigma 70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (612 aa)
         
  0.557
SUN_0273
Outer membrane efflux protein (415 aa)
 
   
  0.554
SUN_2250
Hypothetical protein (161 aa)
   
          0.546
SUN_1570
Hypothetical protein (290 aa)
   
 
      0.545
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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