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xseB protein (Sulfurovum sp. NBC371) - STRING interaction network
"xseB" - Exodeoxyribonuclease VII small subunit in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (70 aa)    
Predicted Functional Partners:
SUN_1788
Carbon-nitrogen family hydrolase (273 aa)
              0.862
SUN_1787
ThiF/MoeB/HesA family protein (231 aa)
              0.839
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (422 aa)
         
    0.800
SUN_1786
Hypothetical protein (113 aa)
              0.705
SUN_1785
Translation initiation inhibitor (131 aa)
              0.690
metX
Homoserine O-acetyltransferase; Involved in the methionine biosynthesis. Catalyzes the transfer of the acetyl group from acetyl-CoA to the hydroxyl group of L-homoserine to yield O-acetyl-L-homoserine (365 aa)
              0.689
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (101 aa)
              0.501
rpmA
50S ribosomal protein L27 (84 aa)
              0.469
SUN_1791
O-acetylhomoserine sulfhydrylase (420 aa)
              0.440
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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