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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SUN_1890 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1890" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1890annotation not available (150 aa)    
Predicted Functional Partners:
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (696 aa)
 
        0.917
purD
annotation not available (422 aa)
   
        0.880
SUN_1887
annotation not available (226 aa)
              0.878
SUN_1888
annotation not available (89 aa)
              0.845
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (729 aa)
              0.825
SUN_2236
annotation not available (577 aa)
   
          0.758
SUN_0540
annotation not available (363 aa)
   
          0.659
SUN_0457
annotation not available (181 aa)
   
          0.616
SUN_0173
annotation not available (281 aa)
   
          0.608
SUN_2250
annotation not available (161 aa)
   
        0.570
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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