STRINGSTRING
SUN_1913 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1913" - Sigma 54 modulation protein/ribosomal protein S30EA in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1913Sigma 54 modulation protein/ribosomal protein S30EA (177 aa)    
Predicted Functional Partners:
SUN_1912
Hypothetical protein (217 aa)
 
          0.735
SUN_1910
Hypothetical protein (285 aa)
              0.669
SUN_1908
Hypothetical protein (1860 aa)
 
          0.644
SUN_1909
Hypothetical protein (233 aa)
              0.583
SUN_1911
Hypothetical protein (150 aa)
              0.570
SUN_1914
Hypothetical protein (249 aa)
              0.533
SUN_2250
Hypothetical protein (161 aa)
   
          0.520
SUN_2136
Hypothetical protein (123 aa)
   
          0.519
SUN_0396
Hypothetical protein (112 aa)
   
          0.480
SUN_0631
Hypothetical protein (190 aa)
   
          0.478
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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