STRINGSTRING
SUN_1923 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1923" - Mechanosensitive ion channel MscS in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_1923Mechanosensitive ion channel MscS (396 aa)    
Predicted Functional Partners:
SUN_1922
Hypothetical protein (246 aa)
              0.655
SUN_1921
Hypothetical protein (300 aa)
 
      0.584
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (467 aa)
   
        0.571
SUN_1213
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
   
 
    0.566
SUN_0083
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (424 aa)
   
 
    0.566
pgk
Phosphoglycerate kinase (398 aa)
       
    0.556
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (266 aa)
              0.514
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (127 aa)
 
        0.472
SUN_1641
Nitrogen regulatory protein P-II (113 aa)
     
      0.438
SUN_1639
Nitrogen regulatory protein P-II (113 aa)
     
      0.438
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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