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trpS protein (Sulfurovum sp. NBC371) - STRING interaction network
"trpS" - tryptophanyl-tRNA synthetase in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpStryptophanyl-tRNA synthetase (319 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase subunit beta (777 aa)
   
   
  0.862
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (414 aa)
   
 
  0.832
argS
arginyl-tRNA synthetase (565 aa)
 
   
  0.778
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (649 aa)
   
   
  0.771
pheS
phenylalanyl-tRNA synthetase subunit alpha (330 aa)
 
   
  0.769
leuS
leucyl-tRNA synthetase (813 aa)
 
   
  0.741
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (467 aa)
 
   
  0.742
thrS
threonyl-tRNA synthetase (604 aa)
   
   
  0.719
cysS
cysteinyl-tRNA synthetase (465 aa)
   
   
  0.699
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (918 aa)
 
   
  0.670
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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