STRINGSTRING
gdhA protein (Sulfurovum sp. NBC371) - STRING interaction network
"gdhA" - Glutamate dehydrogenase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAGlutamate dehydrogenase (453 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (NADPH), large chain (1471 aa)
   
  0.999
SUN_1362
Aspartate aminotransferase (390 aa)
   
 
  0.981
SUN_0570
Isocitrate dehydrogenase (727 aa)
         
  0.980
SUN_1492
Ferredoxin--nitrite reductase (639 aa)
         
  0.978
SUN_0312
Ferredoxin--nitrite reductase (549 aa)
         
  0.971
SUN_0542
ATP citrate synthase subunit 2 (606 aa)
   
 
  0.952
glnA
Glutamine synthase (476 aa)
   
 
  0.948
gltA
Citrate synthase (427 aa)
   
 
  0.934
glsA
Glutaminase (358 aa)
         
  0.925
argJ
Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate (398 aa)
     
  0.917
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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