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SUN_1970 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_1970" - Ribosome-binding factor A in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
SUN_1970Ribosome-binding factor A; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (129 aa)    
Predicted Functional Partners:
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (906 aa)
   
   
  0.961
SUN_1974
Hypothetical protein (155 aa)
 
          0.919
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits (142 aa)
   
      0.906
SUN_1049
Transformation system protein (191 aa)
 
          0.833
SUN_1972
Hypothetical protein (77 aa)
 
          0.827
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (277 aa)
   
   
  0.776
SUN_2200
Hypothetical protein (79 aa)
   
          0.774
SUN_0666
Hypothetical protein (121 aa)
   
          0.772
SUN_2368
Hypothetical protein (176 aa)
   
          0.771
SUN_2043
Hypothetical protein (178 aa)
   
          0.769
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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