STRINGSTRING
SUN_2124 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_2124" - Peptidyl-arginine deiminase family protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_2124Peptidyl-arginine deiminase family protein (342 aa)    
Predicted Functional Partners:
SUN_2125
Hydrolase (290 aa)
 
  0.998
SUN_0876
Carbon-nitrogen hydrolase family protein (377 aa)
   
  0.946
speA
Arginine decarboxylase (626 aa)
 
   
  0.939
SUN_1788
Carbon-nitrogen family hydrolase (273 aa)
 
   
  0.877
SUN_0674
Glutamine-dependent NAD+ synthetase (631 aa)
       
  0.828
SUN_2399
Hydrolase (244 aa)
       
  0.826
SUN_0883
Phosphatidylserine decarboxylase (613 aa)
       
  0.707
SUN_2126
Globin (173 aa)
              0.655
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (409 aa)
   
 
  0.619
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (336 aa)
              0.617
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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