STRINGSTRING
rpe protein (Sulfurovum sp. NBC371) - STRING interaction network
"rpe" - Ribulose-phosphate 3-epimerase in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
rpeRibulose-phosphate 3-epimerase (213 aa)    
Predicted Functional Partners:
SUN_0166
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (659 aa)
  0.998
rpiB
Ribose-5-phosphate isomerase B (153 aa)
       
  0.988
thrS
threonyl-tRNA synthetase (604 aa)
   
    0.838
SUN_0971
Pyruvate/2-oxoglutarate dehydrogenase complex, E1 component subunit beta (325 aa)
     
 
  0.801
SUN_1209
Pyruvate/2-oxoglutarate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (446 aa)
     
 
  0.789
SUN_0968
Pyruvate/2-oxoglutarate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (410 aa)
     
 
  0.789
pgk
Phosphoglycerate kinase (398 aa)
 
 
  0.779
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (608 aa)
 
 
    0.759
trpF
Phosphoribosylanthranilate isomerase (196 aa)
         
  0.743
SUN_0551
D-3-phosphoglycerate dehydrogenase (529 aa)
   
 
    0.737
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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