Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Potassium channel protein (376 aa)
Predicted Functional Partners:
50S ribosomal protein L28 (69 aa)
Aldo/keto reductase-family protein (341 aa)
Hypothetical protein (112 aa)
Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate (398 aa)
Potassium channel protein (235 aa)
Hypothetical protein (190 aa)
Hypothetical protein (74 aa)
Histidinol-phosphate aminotransferase (364 aa)
Apolipoprotein N-acyltransferase (433 aa)
Hypothetical protein (157 aa)
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093 Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371