STRINGSTRING
SUN_2246 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_2246" - long-chain-fatty-acid--CoA ligase in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_2246long-chain-fatty-acid--CoA ligase (514 aa)    
Predicted Functional Partners:
SUN_2247
Long-chain fatty acid transport protein (406 aa)
 
   
  0.933
SUN_1131
Hypothetical protein (568 aa)
 
 
0.894
nagA
N-acetylglucosamine-6-phosphate deacetylase (374 aa)
              0.859
crr
PTS system, IIA component (156 aa)
              0.859
SUN_2248
Hypothetical protein (418 aa)
              0.843
SUN_0875
Long-chain fatty-acid-CoA ligase (511 aa)
   
   
 
0.842
SUN_1179
Chloromuconate cycloisomerase (359 aa)
 
 
  0.831
SUN_1645
Hydrogenase maturation protein HoxX (545 aa)
   
  0.820
SUN_0308
Aldehyde dehydrogenase (478 aa)
 
  0.812
fabH
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids (340 aa)
       
  0.812
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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