STRINGSTRING
SUN_2250 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_2250" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_2250Hypothetical protein (161 aa)    
Predicted Functional Partners:
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5’-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (296 aa)
              0.883
SUN_0540
Hypothetical protein (363 aa)
   
          0.778
SUN_1776
F0F1 ATP synthase subunit B’ (140 aa)
   
        0.772
SUN_0103
Oligosaccharide transferase (706 aa)
   
          0.771
SUN_0184
Hypothetical protein (182 aa)
   
          0.767
SUN_2200
Hypothetical protein (79 aa)
   
          0.762
SUN_1484
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (174 aa)
   
 
      0.758
SUN_2129
Hypothetical protein (226 aa)
   
          0.755
SUN_1912
Hypothetical protein (217 aa)
   
          0.755
SUN_0457
Hypothetical protein (181 aa)
   
          0.747
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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