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ppiC protein (Sulfurovum sp. NBC371) - STRING interaction network
"ppiC" - Peptidyl-prolyl cis-trans isomerase C in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppiCPeptidyl-prolyl cis-trans isomerase C (93 aa)    
Predicted Functional Partners:
dnaG
DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (550 aa)
         
  0.634
SUN_1997
Hypothetical protein (791 aa)
   
 
  0.622
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (279 aa)
   
  0.595
SUN_1105
Histidine triad family protein (121 aa)
   
 
  0.573
SUN_0545
Histidine triad family protein (117 aa)
   
 
  0.573
guaB
Inosine 5’-monophosphate dehydrogenase (481 aa)
     
 
  0.510
SUN_0675
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (175 aa)
     
 
  0.508
SUN_0602
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (179 aa)
     
 
  0.508
SUN_2254
Hypothetical protein (138 aa)
              0.484
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (696 aa)
   
   
  0.472
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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