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rnhB protein (Sulfurovum sp. NBC371) - STRING interaction network
"rnhB" - Ribonuclease HII in Sulfurovum sp. NBC371
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (188 aa)    
Predicted Functional Partners:
polA
DNA polymerase I (898 aa)
 
 
  0.866
cca
Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase (485 aa)
   
 
  0.836
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (355 aa)
     
 
  0.802
pheT
phenylalanyl-tRNA synthetase subunit beta (777 aa)
 
   
  0.784
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (317 aa)
       
  0.747
lpxB
ipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (349 aa)
 
   
  0.707
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (649 aa)
   
   
  0.704
SUN_1113
Hypothetical protein (360 aa)
 
            0.696
SUN_0445
DNA processing protein A (258 aa)
 
          0.642
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (147 aa)
     
 
  0.625
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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