STRINGSTRING
SUN_2280 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_2280" - 2Fe-2S ferredoxin in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_22802Fe-2S ferredoxin (124 aa)    
Predicted Functional Partners:
SUN_0295
Hypothetical protein (188 aa)
       
    0.715
panD
Aspartate decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (122 aa)
              0.685
SUN_2278
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (103 aa)
              0.678
SUN_2281
Hypothetical protein (202 aa)
              0.550
SUN_2283
Hypothetical protein (86 aa)
              0.549
SUN_2282
Hypothetical protein (146 aa)
              0.549
SUN_2284
Hypothetical protein (428 aa)
              0.548
SUN_2225
NADH-quinone oxidoreductase subunit G (820 aa)
 
          0.515
SUN_2227
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (669 aa)
         
  0.417
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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