STRINGSTRING
radC protein (Sulfurovum sp. NBC371) - STRING interaction network
"radC" - DNA repair protein RadC in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
radCDNA repair protein RadC (219 aa)    
Predicted Functional Partners:
SUN_2292
Hypothetical protein (225 aa)
              0.642
hisI
Histidine biosynthesis bifunctional protein HisI (222 aa)
           
  0.517
polA
DNA polymerase I (898 aa)
     
 
  0.515
SUN_0445
DNA processing protein A (258 aa)
   
   
  0.512
SUN_1860
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein (310 aa)
 
          0.490
SUN_0348
Maf-like protein (186 aa)
     
 
  0.478
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (197 aa)
 
     
  0.477
pheT
phenylalanyl-tRNA synthetase subunit beta (777 aa)
     
 
  0.469
SUN_1372
Cell shape-determining protein RodA (378 aa)
     
      0.461
mreB
Rod shape-determining protein MreB (344 aa)
     
      0.461
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
Server load: low (5%) [HD]